Andreotti, David Weese

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IUTA: a tool for effectively detecting differential isoform

6 Thus, detecting differential isoform usage for a gene between tissues or cell lines/ types (differences in the fraction of total expression of a gene. 12 Apr CIDANE: Comprehensive isoform discovery and abundance estimation. Stefan Canzar, Sandro Andreotti, David Weese, Knut Reinert, Gunnar. 4 Dec Metabolic regulation influences cell proliferation. The influence of pyruvate kinase isoforms on tumor cells has been extensively studied, but.

RNAseq: isoform expression quantification and transcript assembly. Slides courtesy from S. Salzberg, C. Trapnell, L. Pachter and K. Okrah. Hello, all! I.m a beginner for RNA-seq data analysis. As far as I know, there are many tools for gene expression(such as cufflinks/HTSeq-Count/even bedtools for. 14 Jan Here we report the design of conformationally constrained peptides that disrupt interactions between PKA and AKAPs in an isoform-selective. 5 Mar This isoform, described first by Nishio et al. (1994), was found in lymphoblastoid cells. Transcripts originate at a unique promoter/exon 30 Jul Significance: This is the first study to uncover the isoform-specific role of 14-3-3 in targeting NMDA receptors to the membrane.